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Library for mass spectrometry
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psmneweval.cpp
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/**
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* \file pappsomspp/processing/cbor/psm/evalscan/psmneweval.cpp
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* \date 21/08/2025
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* \author Olivier Langella
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* \brief add any new eval contained in a double vector
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*/
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/*******************************************************************************
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* Copyright (c) 2025 Olivier Langella <Olivier.Langella@universite-paris-saclay.fr>.
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*
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* This file is part of PAPPSOms-tools.
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*
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* PAPPSOms-tools is free software: you can redistribute it and/or modify
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* it under the terms of the GNU General Public License as published by
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* the Free Software Foundation, either version 3 of the License, or
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* (at your option) any later version.
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*
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* PAPPSOms-tools is distributed in the hope that it will be useful,
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* but WITHOUT ANY WARRANTY; without even the implied warranty of
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* MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
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* GNU General Public License for more details.
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*
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* You should have received a copy of the GNU General Public License
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* along with PAPPSOms-tools. If not, see <http://www.gnu.org/licenses/>.
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*
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******************************************************************************/
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#include "
psmneweval.h
"
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#include "
../cborscanmapbase.h
"
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pappso::cbor::psm::PsmNewEval::PsmNewEval
(std::size_t buffer_scan_size,
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CborStreamWriter
*cbor_output_p,
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const
QString &eval_name,
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const
QJsonObject ¶meters)
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:
PsmFileScanProcessAndCopy
(buffer_scan_size, cbor_output_p, QString(
"add %1"
).append(eval_name))
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{
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qDebug();
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m_newEvalParameters
= parameters;
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m_evalName
= eval_name;
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qDebug();
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}
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pappso::cbor::psm::PsmNewEval::~PsmNewEval
()
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{
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}
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pappso::cbor::psm::CborScanMapBase
*
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pappso::cbor::psm::PsmNewEval::newCborScanMap
()
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{
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CborScanMapBase
*p_cbor_scan_map =
new
CborScanMapBase
(*
this
);
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value_it
= p_cbor_scan_map->
addPsmEvalVectorDouble
(
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m_evalName
,
m_evalKeyValueName
,
value_it
,
m_psmEvalValues
.end());
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return
p_cbor_scan_map;
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}
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void
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pappso::cbor::psm::PsmNewEval::addEvalDoubleVector
(
const
QString &eval_key_value_name,
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std::vector<double> arr_values)
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{
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m_evalKeyValueName
= eval_key_value_name;
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m_psmEvalValues
= arr_values;
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}
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void
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pappso::cbor::psm::PsmNewEval::parameterMapReady
(
pappso::UiMonitorInterface
&monitor
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[[maybe_unused]])
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{
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qDebug();
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QCborMap cbor_neweval_parameters = QCborValue::fromJsonValue(
m_newEvalParameters
).toMap();
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m_cborParameterMap
.insert(
m_evalName
, cbor_neweval_parameters);
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mp_cborOutput
->append(
"parameter_map"
);
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mp_cborOutput
->writeCborMap(
m_cborParameterMap
);
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qDebug();
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}
cborscanmapbase.h
pappso::UiMonitorInterface
Definition
uimonitorinterface.h:50
pappso::cbor::CborStreamWriter
overrides QCborStreamWriter base class to provide convenient functions
Definition
cborstreamwriter.h:46
pappso::cbor::psm::CborScanMapBase
Definition
cborscanmapbase.h:48
pappso::cbor::psm::CborScanMapBase::addPsmEvalVectorDouble
std::vector< double >::iterator addPsmEvalVectorDouble(const QString &eval_name, const QString &eval_value_key, std::vector< double >::iterator begin, std::vector< double >::const_iterator end)
add a new eval key and double values (from a vector) to each PSM
Definition
cborscanmapbase.cpp:86
pappso::cbor::psm::PsmFileReaderBase::m_cborParameterMap
QCborMap m_cborParameterMap
Definition
psmfilereaderbase.h:135
pappso::cbor::psm::PsmFileScanProcessAndCopy::mp_cborOutput
CborStreamWriter * mp_cborOutput
Definition
psmfilescanprocessandcopy.h:87
pappso::cbor::psm::PsmFileScanProcessAndCopy::PsmFileScanProcessAndCopy
PsmFileScanProcessAndCopy(std::size_t buffer_scan_size, CborStreamWriter *cbor_output_p, const QString &operation)
Definition
psmfilescanprocessandcopy.cpp:41
pappso::cbor::psm::PsmNewEval::parameterMapReady
void parameterMapReady(pappso::UiMonitorInterface &monitor) override
Definition
psmneweval.cpp:65
pappso::cbor::psm::PsmNewEval::value_it
std::vector< double >::iterator value_it
Definition
psmneweval.h:62
pappso::cbor::psm::PsmNewEval::addEvalDoubleVector
void addEvalDoubleVector(const QString &eval_key_value_name, std::vector< double > arr_values)
Definition
psmneweval.cpp:57
pappso::cbor::psm::PsmNewEval::~PsmNewEval
virtual ~PsmNewEval()
Definition
psmneweval.cpp:43
pappso::cbor::psm::PsmNewEval::newCborScanMap
pappso::cbor::psm::CborScanMapBase * newCborScanMap() override
Definition
psmneweval.cpp:48
pappso::cbor::psm::PsmNewEval::m_evalName
QString m_evalName
Definition
psmneweval.h:58
pappso::cbor::psm::PsmNewEval::m_newEvalParameters
QJsonObject m_newEvalParameters
Definition
psmneweval.h:57
pappso::cbor::psm::PsmNewEval::m_psmEvalValues
std::vector< double > m_psmEvalValues
Definition
psmneweval.h:60
pappso::cbor::psm::PsmNewEval::PsmNewEval
PsmNewEval(std::size_t buffer_scan_size, CborStreamWriter *cbor_output_p, const QString &eval_name, const QJsonObject ¶meters)
Definition
psmneweval.cpp:31
pappso::cbor::psm::PsmNewEval::m_evalKeyValueName
QString m_evalKeyValueName
Definition
psmneweval.h:59
psmneweval.h
pappsomspp
core
processing
cbor
psm
evalscan
psmneweval.cpp
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